PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10042802
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 350aa    MW: 38135.2 Da    PI: 7.7907
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10042802genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.22e-09198255562
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                  kr++r   NR +A rs +RK  ++ eLe+kv +L++e ++L  ++  l+   + l +e
  Lus10042802 198 KRAKRILANRQSAARSKERKIRYTGELERKVHTLQTEATTLSAQVTVLQRDTSGLNTE 255
                  9*****************************************9998888777666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-15194258IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726196259IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-10198252No hitNo description
PfamPF001708.4E-9198256IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.34E-10198249No hitNo description
CDDcd147031.55E-22199248No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MDSAKYGGKR PLTDDIDQMP EAPQRGWHHR RAHSDTSFRF DDLLLFDPSD LDLSSLDFPN  60
AAPPRGAPMA VDSPREAPMA VDSPSISDDS TSNGCAAPPP NPRARPINHL RSLSVDSDFF  120
DGFGLGYGDE KPGEKGIAAA AGTGGGGGGE RRVHHRHSSS MDGSSCSASF EADSFMDDGM  180
KKAMAPDRLA ELSLIDPKRA KRILANRQSA ARSKERKIRY TGELERKVHT LQTEATTLSA  240
QVTVLQRDTS GLNTENRELK LRLQAMEQQA HLRDALNEAL REEVQRLKIA AGQMPVSNGN  300
PFHRPQYSSQ QPPSQQTQQQ GLPPQSPPPN SQNSNGQPRR GFPNFGQRV*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002300925.21e-140hypothetical protein POPTR_0002s07020g
SwissprotQ9MA751e-105VIP1_ARATH; Transcription factor VIP1
TrEMBLA9PIJ91e-140A9PIJ9_POPTR; Uncharacterized protein
STRINGPOPTR_0005s21300.11e-125(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52143450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.12e-60VIRE2-interacting protein 1